Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a3bpQ9EQG9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a3bpQ9EQG9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col4a3bpQ9EQG9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col4a3bpQ9EQG9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Gm37722-201ENSMUST00000193757 208 ntBASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col4a3bpQ9EQG9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms