Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp2aQ9DB34 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp2aQ9DB34 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Ank2-226ENSMUST00000189368 339 ntBASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Gm44430-201ENSMUST00000203376 995 ntBASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp2aQ9DB34 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chmp2aQ9DB34 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms