Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp5Q9D7S9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Gm27463-201ENSMUST00000183569 57 ntBASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Gm36967-201ENSMUST00000193814 266 ntBASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp5Q9D7S9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chmp5Q9D7S9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Asic1-205ENSMUST00000228185 1818 ntBASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp5Q9D7S9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Gm18421-201ENSMUST00000204122 625 ntBASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp5Q9D7S9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms