Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.16■□□□□ 0.66
Stag1Q9D3E6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Stag1Q9D3E6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Stag1Q9D3E6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.14■□□□□ 0.66
Stag1Q9D3E6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Stag1Q9D3E6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.14■□□□□ 0.65
Stag1Q9D3E6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Stag1Q9D3E6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Stag1Q9D3E6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Gm11779-201ENSMUST00000118541 368 ntBASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Stag1Q9D3E6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Gm13036-201ENSMUST00000117799 748 ntBASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Stag1Q9D3E6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms