Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 App-207ENSMUST00000227737 2827 ntBASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chaf1bQ9D0N7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chaf1bQ9D0N7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Chaf1bQ9D0N7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Trmt13-210ENSMUST00000198454 880 ntBASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chaf1bQ9D0N7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chaf1bQ9D0N7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chaf1bQ9D0N7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms