Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Gm18421-201ENSMUST00000204122 625 ntBASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.63■□□□□ 0.25
Snf8Q9CZ28 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Gm21814-202ENSMUST00000203277 873 ntBASIC16.62■□□□□ 0.25
Snf8Q9CZ28 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snf8Q9CZ28 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Asic1-205ENSMUST00000228185 1818 ntBASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.61■□□□□ 0.25
Snf8Q9CZ28 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 App-207ENSMUST00000227737 2827 ntBASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snf8Q9CZ28 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snf8Q9CZ28 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.59■□□□□ 0.25
Snf8Q9CZ28 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snf8Q9CZ28 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snf8Q9CZ28 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snf8Q9CZ28 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms