Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Il3ra-202ENSMUST00000223589 738 ntBASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.94□□□□□ -0.02
Trim13Q9CYB0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim13Q9CYB0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Gm7638-201ENSMUST00000121348 967 ntBASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim13Q9CYB0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim13Q9CYB0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Gm18958-201ENSMUST00000174258 762 ntBASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms