Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Gm10013-201ENSMUST00000106074 672 ntBASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim11Q99PQ2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim11Q99PQ2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim11Q99PQ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim11Q99PQ2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms