Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.74■□□□□ 0.11
Msh4Q99MT2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.73■□□□□ 0.11
Msh4Q99MT2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.73■□□□□ 0.11
Msh4Q99MT2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Msh4Q99MT2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Gm27704-201ENSMUST00000185094 107 ntBASIC15.72■□□□□ 0.11
Msh4Q99MT2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.72■□□□□ 0.11
Msh4Q99MT2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Msh4Q99MT2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msh4Q99MT2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh4Q99MT2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msh4Q99MT2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Msh4Q99MT2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Msh4Q99MT2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.7■□□□□ 0.1
Msh4Q99MT2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Msh4Q99MT2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms