Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tpgs1Q99MS8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.78■□□□□ 0.28
Tpgs1Q99MS8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Tpgs1Q99MS8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tpgs1Q99MS8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Gm6257-201ENSMUST00000163864 910 ntBASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Gm25745-201ENSMUST00000174945 133 ntBASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Birc2-201ENSMUST00000054878 378 ntBASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tpgs1Q99MS8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Gm12644-201ENSMUST00000119935 606 ntBASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.75■□□□□ 0.27
Tpgs1Q99MS8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms