Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm13436-201ENSMUST00000120418 567 ntBASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm37055-201ENSMUST00000191866 133 ntBASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdk5rap3Q99LM2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Prob1-201ENSMUST00000097619 3021 ntBASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk5rap3Q99LM2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk5rap3Q99LM2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk5rap3Q99LM2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.71■□□□□ 0.26
Cdk5rap3Q99LM2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms