Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44357-201ENSMUST00000195897 142 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm19658-201ENSMUST00000196231 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44367-201ENSMUST00000196836 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44350-201ENSMUST00000197197 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44390-201ENSMUST00000197533 144 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44313-201ENSMUST00000198018 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44486-201ENSMUST00000198508 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44314-201ENSMUST00000199263 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44394-201ENSMUST00000199558 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44484-201ENSMUST00000199873 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44466-201ENSMUST00000200264 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Gm44359-201ENSMUST00000200671 138 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Rps4l-201ENSMUST00000071745 943 ntBASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clcc1Q99LI2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Gm18733-201ENSMUST00000173950 856 ntBASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Gm6443-201ENSMUST00000203599 874 ntBASIC15.89■□□□□ 0.13
Clcc1Q99LI2 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.89■□□□□ 0.13
Clcc1Q99LI2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clcc1Q99LI2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Gm18195-201ENSMUST00000207604 706 ntBASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Gm7506-201ENSMUST00000207758 815 ntBASIC15.88■□□□□ 0.13
Clcc1Q99LI2 AW822252-206ENSMUST00000208904 237 ntBASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.88■□□□□ 0.13
Clcc1Q99LI2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clcc1Q99LI2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms