Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha11Q91Y19 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha11Q91Y19 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Gm27459-201ENSMUST00000184860 107 ntBASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdha11Q91Y19 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdha11Q91Y19 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdha11Q91Y19 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Pcdha11Q91Y19 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdha11Q91Y19 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Pcdha11Q91Y19 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms