Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha3Q91Y16 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Gm10052-201ENSMUST00000168019 960 ntBASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Gm7729-201ENSMUST00000050143 801 ntBASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha3Q91Y16 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Gm36967-201ENSMUST00000193814 266 ntBASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha3Q91Y16 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Gm27357-201ENSMUST00000183754 135 ntBASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Gm17807-201ENSMUST00000186869 298 ntBASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdha3Q91Y16 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha3Q91Y16 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha3Q91Y16 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha3Q91Y16 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdha3Q91Y16 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Ank2-226ENSMUST00000189368 339 ntBASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Gm44430-201ENSMUST00000203376 995 ntBASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdha3Q91Y16 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms