Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dancr-204ENSMUST00000132389 2347 ntBASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Gm29518-201ENSMUST00000190858 372 ntBASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Gm45328-201ENSMUST00000210942 917 ntBASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb1Q91Y08 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Gm17808-201ENSMUST00000200859 894 ntBASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb1Q91Y08 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb1Q91Y08 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb1Q91Y08 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb1Q91Y08 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms