Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb6Q91XZ4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb6Q91XZ4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb6Q91XZ4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Mir6404-201ENSMUST00000183699 94 ntBASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb6Q91XZ4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb6Q91XZ4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb6Q91XZ4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms