Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb8Q91XZ2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb8Q91XZ2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Gm10013-201ENSMUST00000106074 672 ntBASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb8Q91XZ2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb8Q91XZ2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhb8Q91XZ2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb8Q91XZ2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb8Q91XZ2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb8Q91XZ2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb8Q91XZ2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm10231-201ENSMUST00000181584 441 ntBASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm10175-202ENSMUST00000208752 441 ntBASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb8Q91XZ2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms