Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Gm24589-201ENSMUST00000116692 94 ntBASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga9Q91XX9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhga9Q91XX9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhga9Q91XX9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms