Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhgc3Q91XX1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Gm12527-201ENSMUST00000117967 564 ntBASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhgc3Q91XX1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhgc3Q91XX1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Gm8520-201ENSMUST00000186517 868 ntBASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhgc3Q91XX1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Gm42545-201ENSMUST00000202755 922 ntBASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhgc3Q91XX1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms