Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Gm14494-201ENSMUST00000118786 435 ntBASIC18.44■□□□□ 0.54
Trex1Q91XB0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Gm9727-201ENSMUST00000161387 555 ntBASIC18.44■□□□□ 0.54
Trex1Q91XB0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.44■□□□□ 0.54
Trex1Q91XB0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trex1Q91XB0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Gm5682-201ENSMUST00000173402 505 ntBASIC18.43■□□□□ 0.54
Trex1Q91XB0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trex1Q91XB0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.43■□□□□ 0.54
Trex1Q91XB0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.42■□□□□ 0.54
Trex1Q91XB0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Gm25925-201ENSMUST00000158314 306 ntBASIC18.42■□□□□ 0.54
Trex1Q91XB0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trex1Q91XB0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Gm4995-201ENSMUST00000117247 432 ntBASIC18.41■□□□□ 0.54
Trex1Q91XB0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.41■□□□□ 0.54
Trex1Q91XB0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trex1Q91XB0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trex1Q91XB0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.4■□□□□ 0.54
Trex1Q91XB0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trex1Q91XB0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms