Protein–RNA interactions for Protein: Q91V98

Cd248, Endosialin, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd248Q91V98 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd248Q91V98 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd248Q91V98 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cd248Q91V98 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd248Q91V98 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd248Q91V98 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.23■□□□□ 0.67
Cd248Q91V98 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.23■□□□□ 0.67
Cd248Q91V98 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd248Q91V98 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.23■□□□□ 0.67
Cd248Q91V98 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd248Q91V98 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cd248Q91V98 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cd248Q91V98 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Gm15358-201ENSMUST00000119249 520 ntBASIC19.22■□□□□ 0.67
Cd248Q91V98 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.22■□□□□ 0.67
Cd248Q91V98 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.22■□□□□ 0.67
Cd248Q91V98 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.22■□□□□ 0.67
Cd248Q91V98 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.22■□□□□ 0.67
Cd248Q91V98 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.22■□□□□ 0.67
Cd248Q91V98 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cd248Q91V98 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.22■□□□□ 0.67
Cd248Q91V98 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd248Q91V98 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.21■□□□□ 0.67
Cd248Q91V98 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Gm5745-201ENSMUST00000183748 313 ntBASIC19.21■□□□□ 0.67
Cd248Q91V98 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cd248Q91V98 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.21■□□□□ 0.67
Cd248Q91V98 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.21■□□□□ 0.67
Cd248Q91V98 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd248Q91V98 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cd248Q91V98 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd248Q91V98 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Cd248Q91V98 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Gm5177-201ENSMUST00000183092 997 ntBASIC19.2■□□□□ 0.66
Cd248Q91V98 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd248Q91V98 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.2■□□□□ 0.66
Cd248Q91V98 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cd248Q91V98 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd248Q91V98 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Gm27301-201ENSMUST00000184012 127 ntBASIC19.19■□□□□ 0.66
Cd248Q91V98 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Cd248Q91V98 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd248Q91V98 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.18■□□□□ 0.66
Cd248Q91V98 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.18■□□□□ 0.66
Cd248Q91V98 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.18■□□□□ 0.66
Cd248Q91V98 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd248Q91V98 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd248Q91V98 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cd248Q91V98 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Cd248Q91V98 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd248Q91V98 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms