Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vsx1Q91V10 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vsx1Q91V10 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vsx1Q91V10 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.93■□□□□ 0.14
Vsx1Q91V10 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.93■□□□□ 0.14
Vsx1Q91V10 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.92■□□□□ 0.14
Vsx1Q91V10 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.92■□□□□ 0.14
Vsx1Q91V10 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Gm13216-201ENSMUST00000117145 591 ntBASIC15.92■□□□□ 0.14
Vsx1Q91V10 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.92■□□□□ 0.14
Vsx1Q91V10 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vsx1Q91V10 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.92■□□□□ 0.14
Vsx1Q91V10 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vsx1Q91V10 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vsx1Q91V10 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.9■□□□□ 0.14
Vsx1Q91V10 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Mir3113-201ENSMUST00000175478 76 ntBASIC15.9■□□□□ 0.14
Vsx1Q91V10 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.9■□□□□ 0.14
Vsx1Q91V10 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vsx1Q91V10 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vsx1Q91V10 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms