Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Gm43183-201ENSMUST00000200632 547 ntBASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rab40cQ8VHQ4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rab40cQ8VHQ4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Actl10-202ENSMUST00000226583 1501 ntBASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab40cQ8VHQ4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Gm7638-201ENSMUST00000121348 967 ntBASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab40cQ8VHQ4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms