Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssx2ipQ8VC66 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ssx2ipQ8VC66 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssx2ipQ8VC66 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssx2ipQ8VC66 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ssx2ipQ8VC66 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssx2ipQ8VC66 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Gm6345-202ENSMUST00000180900 204 ntBASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssx2ipQ8VC66 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Gm11355-201ENSMUST00000121120 306 ntBASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 AA414768-201ENSMUST00000121924 1257 ntBASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssx2ipQ8VC66 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ssx2ipQ8VC66 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Gm11336-201ENSMUST00000118168 334 ntBASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssx2ipQ8VC66 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms