Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atp2a1Q8R429 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Gm7506-201ENSMUST00000207758 815 ntBASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atp2a1Q8R429 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atp2a1Q8R429 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atp2a1Q8R429 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atp2a1Q8R429 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Atp2a1Q8R429 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Gm12497-201ENSMUST00000138778 237 ntBASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Mir5131-201ENSMUST00000175426 93 ntBASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Gm4535-201ENSMUST00000182274 558 ntBASIC17.95■□□□□ 0.46
Atp2a1Q8R429 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Gm10355-201ENSMUST00000097146 517 ntBASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atp2a1Q8R429 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Gm25990-201ENSMUST00000102440 86 ntBASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Gm12350-201ENSMUST00000121208 462 ntBASIC17.94■□□□□ 0.46
Atp2a1Q8R429 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atp2a1Q8R429 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms