Protein–RNA interactions for Protein: Q8K1J5

Sde2, Replication stress response regulator SDE2, mousemouse

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sde2Q8K1J5 Gm14822-201ENSMUST00000122247 291 ntBASIC19.46■□□□□ 0.71
Sde2Q8K1J5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.46■□□□□ 0.71
Sde2Q8K1J5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sde2Q8K1J5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sde2Q8K1J5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sde2Q8K1J5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sde2Q8K1J5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
Sde2Q8K1J5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sde2Q8K1J5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sde2Q8K1J5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sde2Q8K1J5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sde2Q8K1J5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sde2Q8K1J5 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms