Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.66■□□□□ 0.26
Snx30Q8CE50 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx30Q8CE50 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Gm6623-201ENSMUST00000173570 544 ntBASIC16.65■□□□□ 0.26
Snx30Q8CE50 Gm6345-202ENSMUST00000180900 204 ntBASIC16.65■□□□□ 0.26
Snx30Q8CE50 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx30Q8CE50 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx30Q8CE50 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.63■□□□□ 0.25
Snx30Q8CE50 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Gm7977-201ENSMUST00000193787 748 ntBASIC16.63■□□□□ 0.25
Snx30Q8CE50 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx30Q8CE50 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms