Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vcpip1Q8CDG3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vcpip1Q8CDG3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 App-207ENSMUST00000227737 2827 ntBASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcpip1Q8CDG3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vcpip1Q8CDG3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcpip1Q8CDG3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcpip1Q8CDG3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms