Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc60Q8C4J0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc60Q8C4J0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Gm18669-201ENSMUST00000216049 778 ntBASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc60Q8C4J0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc60Q8C4J0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Rprl3-201ENSMUST00000157400 290 ntBASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc60Q8C4J0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Gm28033-201ENSMUST00000184224 96 ntBASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms