Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Gm7889-201ENSMUST00000185591 958 ntBASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rft1Q8C3B8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Gm9731-201ENSMUST00000209480 747 ntBASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rft1Q8C3B8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Gm2274-201ENSMUST00000184539 609 ntBASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Gm7791-201ENSMUST00000219066 539 ntBASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rft1Q8C3B8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rft1Q8C3B8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms