Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp44Q8C2S0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp44Q8C2S0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp44Q8C2S0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Usp44Q8C2S0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Gm25406-201ENSMUST00000157599 105 ntBASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp44Q8C2S0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.85■□□□□ 0.61
Usp44Q8C2S0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.85■□□□□ 0.61
Usp44Q8C2S0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp44Q8C2S0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Gm18669-201ENSMUST00000216049 778 ntBASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp44Q8C2S0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp44Q8C2S0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp44Q8C2S0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp44Q8C2S0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp44Q8C2S0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms