Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd9Q8BYH8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd9Q8BYH8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd9Q8BYH8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chd9Q8BYH8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd9Q8BYH8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd9Q8BYH8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm45612-201ENSMUST00000211320 160 ntBASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Mir1247-201ENSMUST00000116706 82 ntBASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm11745-201ENSMUST00000121669 448 ntBASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm9257-201ENSMUST00000221254 232 ntBASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm12138-201ENSMUST00000122180 951 ntBASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd9Q8BYH8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd9Q8BYH8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Gm12176-201ENSMUST00000121420 875 ntBASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chd9Q8BYH8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Gm15824-201ENSMUST00000119516 955 ntBASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Gm28631-201ENSMUST00000190740 334 ntBASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Chd9Q8BYH8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms