Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp43Q8BUM9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.33■□□□□ 0.21
Usp43Q8BUM9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp43Q8BUM9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp43Q8BUM9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Usp43Q8BUM9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp43Q8BUM9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp43Q8BUM9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp43Q8BUM9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms