Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Gm13418-201ENSMUST00000119097 944 ntBASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Gm43514-201ENSMUST00000198852 424 ntBASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Gm8655-201ENSMUST00000221159 852 ntBASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr7Q8BU04 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Gm25990-201ENSMUST00000102440 86 ntBASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Gm11780-201ENSMUST00000136880 516 ntBASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ubr7Q8BU04 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ubr7Q8BU04 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr7Q8BU04 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr7Q8BU04 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr7Q8BU04 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Ubr7Q8BU04 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr7Q8BU04 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ubr7Q8BU04 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Gm18195-201ENSMUST00000207604 706 ntBASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.2■□□□□ 0.18
Ubr7Q8BU04 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr7Q8BU04 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ubr7Q8BU04 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr7Q8BU04 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr7Q8BU04 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr7Q8BU04 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.19■□□□□ 0.18
Ubr7Q8BU04 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr7Q8BU04 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr7Q8BU04 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms