Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf7Q8BTV2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf7Q8BTV2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpsf7Q8BTV2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Gm7977-201ENSMUST00000193787 748 ntBASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpsf7Q8BTV2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cpsf7Q8BTV2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Gm37055-201ENSMUST00000191866 133 ntBASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf7Q8BTV2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cpsf7Q8BTV2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Gm18115-201ENSMUST00000221209 621 ntBASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf7Q8BTV2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms