Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.31■□□□□ 0.36
Nop53Q8BK35 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nop53Q8BK35 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nop53Q8BK35 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Nop53Q8BK35 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.28■□□□□ 0.36
Nop53Q8BK35 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.28■□□□□ 0.36
Nop53Q8BK35 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nop53Q8BK35 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms