Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.99■□□□□ 0.63
U2af1l4Q8BGJ9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
U2af1l4Q8BGJ9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.97■□□□□ 0.63
U2af1l4Q8BGJ9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
U2af1l4Q8BGJ9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
U2af1l4Q8BGJ9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms