Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc116Q80X53 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Mir770-201ENSMUST00000103252 94 ntBASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Prob1-201ENSMUST00000097619 3021 ntBASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Ccdc116Q80X53 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Ccdc116Q80X53 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 App-207ENSMUST00000227737 2827 ntBASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc116Q80X53 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms