Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim36Q80WG7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Gm22697-201ENSMUST00000175194 63 ntBASIC15.59■□□□□ 0.09
Trim36Q80WG7 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.59■□□□□ 0.09
Trim36Q80WG7 Gm27000-201ENSMUST00000182943 842 ntBASIC15.59■□□□□ 0.09
Trim36Q80WG7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Gm10819-201ENSMUST00000099988 561 ntBASIC15.59■□□□□ 0.09
Trim36Q80WG7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim36Q80WG7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim36Q80WG7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim36Q80WG7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim36Q80WG7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim36Q80WG7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim36Q80WG7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Gm6345-202ENSMUST00000180900 204 ntBASIC15.58■□□□□ 0.08
Trim36Q80WG7 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.58■□□□□ 0.08
Trim36Q80WG7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim36Q80WG7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 AA414768-201ENSMUST00000121924 1257 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm16061-201ENSMUST00000122167 857 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm18101-201ENSMUST00000215769 548 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm7370-201ENSMUST00000219471 767 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Gm7367-201ENSMUST00000057611 492 ntBASIC15.57■□□□□ 0.08
Trim36Q80WG7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim36Q80WG7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms