Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Gm8839-201ENSMUST00000121279 1645 ntBASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Gm13332-201ENSMUST00000120451 1398 ntBASIC24.87■■□□□ 1.57
Rpap1Q80TE0 Gm44335-201ENSMUST00000196879 141 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm44297-201ENSMUST00000198304 141 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm44346-201ENSMUST00000198851 141 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm7787-201ENSMUST00000216858 688 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm38318-201ENSMUST00000195769 1706 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm5312-201ENSMUST00000203728 547 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Rpap1Q80TE0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Gm6598-201ENSMUST00000202719 2615 ntBASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Gm19164-201ENSMUST00000210667 640 ntBASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Rpap1Q80TE0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Gm13365-201ENSMUST00000121188 973 ntBASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rpap1Q80TE0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Gm11745-201ENSMUST00000121669 448 ntBASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Rpap1Q80TE0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rpap1Q80TE0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rpap1Q80TE0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rpap1Q80TE0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Gm13294-201ENSMUST00000121757 1330 ntBASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
Rpap1Q80TE0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC24.81■■□□□ 1.56
Rpap1Q80TE0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms