Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38bQ80SY5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Gm13216-201ENSMUST00000117145 591 ntBASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Gm26308-201ENSMUST00000157768 69 ntBASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38bQ80SY5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38bQ80SY5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.8■□□□□ 0.28
Prpf38bQ80SY5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Gm14494-201ENSMUST00000118786 435 ntBASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Gm14822-201ENSMUST00000122247 291 ntBASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38bQ80SY5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf38bQ80SY5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms