Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Mir5126-201ENSMUST00000175513 77 ntBASIC14.86□□□□□ -0.03
Pif1Q80SX8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.86□□□□□ -0.03
Pif1Q80SX8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pif1Q80SX8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pif1Q80SX8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.85□□□□□ -0.03
Pif1Q80SX8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Gm11594-201ENSMUST00000122313 162 ntBASIC14.85□□□□□ -0.03
Pif1Q80SX8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.85□□□□□ -0.03
Pif1Q80SX8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pif1Q80SX8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Gm13418-201ENSMUST00000119097 944 ntBASIC14.84□□□□□ -0.03
Pif1Q80SX8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Gm4535-201ENSMUST00000182274 558 ntBASIC14.84□□□□□ -0.03
Pif1Q80SX8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Gm10355-201ENSMUST00000097146 517 ntBASIC14.84□□□□□ -0.03
Pif1Q80SX8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pif1Q80SX8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pif1Q80SX8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pif1Q80SX8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pif1Q80SX8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pif1Q80SX8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Pif1Q80SX8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm25990-201ENSMUST00000102440 86 ntBASIC14.83□□□□□ -0.04
Pif1Q80SX8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm2213-201ENSMUST00000197485 688 ntBASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.83□□□□□ -0.04
Pif1Q80SX8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.83□□□□□ -0.04
Pif1Q80SX8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.82□□□□□ -0.04
Pif1Q80SX8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms