Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3d21Q7TSG5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Sh3d21Q7TSG5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Sh3d21Q7TSG5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sh3d21Q7TSG5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Gm29518-201ENSMUST00000190858 372 ntBASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3d21Q7TSG5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh3d21Q7TSG5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3d21Q7TSG5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Sh3d21Q7TSG5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3d21Q7TSG5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms