Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfx4Q7TNK1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Gm7638-201ENSMUST00000121348 967 ntBASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Gm10602-201ENSMUST00000098239 609 ntBASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rfx4Q7TNK1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.52■□□□□ 0.08
Rfx4Q7TNK1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rfx4Q7TNK1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 App-207ENSMUST00000227737 2827 ntBASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfx4Q7TNK1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms