Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sned1Q70E20 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sned1Q70E20 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sned1Q70E20 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sned1Q70E20 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.39■□□□□ 0.69
Sned1Q70E20 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sned1Q70E20 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Gm2423-201ENSMUST00000074863 733 ntBASIC19.39■□□□□ 0.69
Sned1Q70E20 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sned1Q70E20 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sned1Q70E20 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sned1Q70E20 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.38■□□□□ 0.69
Sned1Q70E20 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Gm27430-201ENSMUST00000184585 107 ntBASIC19.38■□□□□ 0.69
Sned1Q70E20 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.38■□□□□ 0.69
Sned1Q70E20 Gm44333-201ENSMUST00000197168 107 ntBASIC19.38■□□□□ 0.69
Sned1Q70E20 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sned1Q70E20 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Sned1Q70E20 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sned1Q70E20 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sned1Q70E20 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sned1Q70E20 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.37■□□□□ 0.69
Sned1Q70E20 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.37■□□□□ 0.69
Sned1Q70E20 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Gm24158-201ENSMUST00000175263 71 ntBASIC19.37■□□□□ 0.69
Sned1Q70E20 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Gm18057-201ENSMUST00000208220 503 ntBASIC19.37■□□□□ 0.69
Sned1Q70E20 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.37■□□□□ 0.69
Sned1Q70E20 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.37■□□□□ 0.69
Sned1Q70E20 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sned1Q70E20 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.36■□□□□ 0.69
Sned1Q70E20 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Gm12008-201ENSMUST00000117791 755 ntBASIC19.36■□□□□ 0.69
Sned1Q70E20 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.36■□□□□ 0.69
Sned1Q70E20 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.36■□□□□ 0.69
Sned1Q70E20 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sned1Q70E20 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Sned1Q70E20 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sned1Q70E20 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.35■□□□□ 0.69
Sned1Q70E20 Gm5779-201ENSMUST00000218467 910 ntBASIC19.35■□□□□ 0.69
Sned1Q70E20 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sned1Q70E20 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sned1Q70E20 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sned1Q70E20 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sned1Q70E20 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sned1Q70E20 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sned1Q70E20 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sned1Q70E20 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sned1Q70E20 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Gm15693-201ENSMUST00000120470 637 ntBASIC19.34■□□□□ 0.69
Sned1Q70E20 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.34■□□□□ 0.69
Sned1Q70E20 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sned1Q70E20 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.34■□□□□ 0.69
Sned1Q70E20 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.34■□□□□ 0.69
Sned1Q70E20 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sned1Q70E20 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sned1Q70E20 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms