Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Gm44872-201ENSMUST00000207864 420 ntBASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx55Q6ZPL9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Gm9682-201ENSMUST00000197505 556 ntBASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx55Q6ZPL9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx55Q6ZPL9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx55Q6ZPL9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx55Q6ZPL9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx55Q6ZPL9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx55Q6ZPL9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Gm18489-201ENSMUST00000172565 551 ntBASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Gm27494-201ENSMUST00000184735 189 ntBASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Gm7787-201ENSMUST00000216858 688 ntBASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx55Q6ZPL9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms