Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Gm17971-201ENSMUST00000190239 806 ntBASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc44a1Q6X893 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc44a1Q6X893 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Gm12644-201ENSMUST00000119935 606 ntBASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Gm25745-201ENSMUST00000174945 133 ntBASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Gm34391-201ENSMUST00000203706 907 ntBASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Gm9172-201ENSMUST00000212092 954 ntBASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc44a1Q6X893 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Birc2-201ENSMUST00000054878 378 ntBASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc44a1Q6X893 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a1Q6X893 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Slc44a1Q6X893 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a1Q6X893 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a1Q6X893 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc44a1Q6X893 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc44a1Q6X893 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms