Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Nup98Q6PFD9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup98Q6PFD9 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.88■□□□□ 0.61
Nup98Q6PFD9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Gm6736-201ENSMUST00000166583 948 ntBASIC18.87■□□□□ 0.61
Nup98Q6PFD9 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.87■□□□□ 0.61
Nup98Q6PFD9 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.87■□□□□ 0.61
Nup98Q6PFD9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup98Q6PFD9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Gm2213-201ENSMUST00000197485 688 ntBASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Haglr-201ENSMUST00000100000 2085 ntBASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nup98Q6PFD9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.85■□□□□ 0.61
Nup98Q6PFD9 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.85■□□□□ 0.61
Nup98Q6PFD9 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nup98Q6PFD9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm25925-201ENSMUST00000158314 306 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Gm18246-201ENSMUST00000221023 728 ntBASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup98Q6PFD9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms