Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Gm11539-201ENSMUST00000119837 557 ntBASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarcd3Q6P9Z1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarcd3Q6P9Z1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd3Q6P9Z1 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.79□□□□□ -0.04
Smarcd3Q6P9Z1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms