Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Abcf1Q6P542 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Abcf1Q6P542 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Gm16061-201ENSMUST00000122167 857 ntBASIC18.08■□□□□ 0.48
Abcf1Q6P542 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Abcf1Q6P542 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.07■□□□□ 0.48
Abcf1Q6P542 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.07■□□□□ 0.48
Abcf1Q6P542 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abcf1Q6P542 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Abcf1Q6P542 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Gm7977-201ENSMUST00000193787 748 ntBASIC18.06■□□□□ 0.48
Abcf1Q6P542 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.06■□□□□ 0.48
Abcf1Q6P542 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abcf1Q6P542 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.05■□□□□ 0.48
Abcf1Q6P542 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abcf1Q6P542 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abcf1Q6P542 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms